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来源于Micrococcus luteus的复苏促进因子异源表达及其对活性污泥中休眠细菌的促生长作用
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浙江省科技计划(2017F30030,2017C33016);浙江省自然科学基金(LY18E080005);浙江省重大科技专项(2015C03007)


Heterologous expression of resuscitation promoting factor from Micrococcus luteus and promotes growth dormant bacteria from activated sludge
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    摘要:

    【背景】复苏促进因子(Resuscitation promoting factor,RPF)是由某些放线菌分泌的一类活性蛋白质,最初在Micrococcus luteus中被发现。它不但能够复苏休眠细菌恢复生长,而且对正常的细菌也有促生长效果。然而关于RPF对于环境样品中除原始宿主以外细菌的复苏促进作用研究还鲜有报道。【目的】以寻找新的菌种资源、开发环境功能菌角度研究了RPF对环境样品中潜在休眠菌群的复苏促进作用。【方法】首先对来源于Micrococcus luteus IAM 14879的RPF (MlRPF)蛋白序列进行生物信息学分析和同源模建;随后克隆了MlRPF编码基因并在大肠杆菌中异源表达;最后利用重组MlRPF对活性污泥样品中潜在的休眠细菌开展了复苏促生长研究。【结果】MlRPF在进化树上处于单独分支,远离其它RPF家族成员;模建结构分析表明MlRPF具有与C型溶菌酶相似的催化结构域,这有助于解释RPF家族蛋白具有溶解酶活性;重组MlRPF在大肠杆菌中获得了可溶性表达,它能够促进休眠态M. luteus IAM 14879生长,保留了其生理活性;利用重组MlRPF从某污水厂活性污泥样品中分离获得了Dietzia、Paracoccus、Rhodococcus和Brevundimonas菌株。【结论】为环境样品中微生物多样性研究及特殊微生物资源的发掘提供新的方法,也为基于MlRPF的废水生物强化处理技术研发提供理论依据。

    Abstract:

    [Background] Resuscitation promoting factor (RPF) is an active protein secreted by some different actinobacteria species, which was first reported in Micrococcus luteus. It resuscitates the dormant bacteria and promotes the growth of active bacteria. However, few studies have investigated its contribution in environmental samples to the growth or resuscitation of bacteria other than the original host. [Objective] In order to find novel strains and explore the functional bacteria, we investigated the role of RPF in promoting the latent dormant bacteria from specific environmental sample. [Methods] Firstly, bioinformatics analysis and homology modeling of Micrococcus luteus RPF (MlRPF) was performed. Subsequently, the MlRPF encoding gene was cloned and expressed in Escherichia coli; Finally, we used the purified recombinant MlRPF to study the resuscitation effect toward latent dormant bacteria from an activated sludge sample. [Results] Bioinformatics analysis revealed that the MlRPF branched separately and was distant from other RPF family members in the phylogenetic tree. Structural analysis of its “RPF-domain” suggested that MlRPF has a similar catalytic structure domain as C-type lysozyme, this finding helps explain why RPF family members have lysozyme-like activity; the recombinant MlRPF was expressed in soluble form in E. coli expression system, could promote the growth of M. luteus IAM 14879 and retain its physiological activity. By used purified recombinant MlRPF, we isolated Dietzia, Paracoccus, Rhodococcus, and Brevundimonas strains from an activated sludge sample. [Conclusion] These results not only provide a novel method for the study of microbial diversity and the exploration of special microbial resources in environmental samples, but also provide a theoretical basis for the research and development of wastewater bioaugmentation technology based on MlRPF.

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张宇,王慧荣,梅荣武,李明智,李欲如,丁林贤,苏晓梅,朱瑞芬. 来源于Micrococcus luteus的复苏促进因子异源表达及其对活性污泥中休眠细菌的促生长作用[J]. 微生物学通报, 2018, 45(11): 2364-2375

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  • 在线发布日期: 2018-11-02
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